HL_8CRX_084
3D structure
- PDB id
- 8CRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- G(PSU)AAC(3TD)A(PSU)AAC
- Length
- 11 nucleotides
- Bulged bases
- 8CRX|1|a|A|2096, 8CRX|1|a|C|2097, 8CRX|1|a|A|2099
- QA status
- Modified nucleotides: PSU, 3TD
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8CRX_084 not in the Motif Atlas
- Homologous match to HL_5J7L_181
- Geometric discrepancy: 0.2059
- The information below is about HL_5J7L_181
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_25847.2
- Basepair signature
- cWW-F-cSH-tHW-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
8CRX|1|a|G|2093
8CRX|1|a|PSU|2094
8CRX|1|a|A|2095
8CRX|1|a|A|2096
8CRX|1|a|C|2097
8CRX|1|a|3TD|2098
8CRX|1|a|A|2099
8CRX|1|a|PSU|2100
8CRX|1|a|A|2101
8CRX|1|a|A|2102
8CRX|1|a|C|2103
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain C
- Transfer RNA; tRNA
- Chain N
- 30S ribosomal protein S13
- Chain Y
- 32MF mRNA
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