HL_8E36_012

3D structure

PDB id

8E36 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound streptogramin A analog 3146

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

8E36|1|I|G|386, 8E36|1|I|G|389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8E36_012 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.0913

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

8E36|1|I|A|382
8E36|1|I|C|383
8E36|1|I|A|384
8E36|1|I|C|385
8E36|1|I|G|386
8E36|1|I|U|387
8E36|1|I|G|388
8E36|1|I|G|389
8E36|1|I|U|390
8E36|1|I|A|391
8E36|1|I|U|392

Current chains

Chain I

23S ribosomal RNA

Nearby chains