HL_8E5T_021
3D structure
- PDB id
- 8E5T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast co-transcriptional Noc1-Noc2 RNP assembly checkpoint intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CAUUCUG
- Length
- 7 nucleotides
- Bulged bases
- 8E5T|1|3|C|15
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8E5T_021 not in the Motif Atlas
- Geometric match to HL_8KAH_003
- Geometric discrepancy: 0.267
- The information below is about HL_8KAH_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89457.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
8E5T|1|3|C|11
8E5T|1|3|A|12
8E5T|1|3|U|13
8E5T|1|3|U|14
8E5T|1|3|C|15
8E5T|1|3|U|16
8E5T|1|3|G|17
Current chains
- Chain 3
- ITS2 ribosomal RNA
Nearby chains
- Chain K
- Proteasome-interacting protein CIC1
Coloring options: