HL_8ETI_031
3D structure
- PDB id
- 8ETI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fkbp39 associated 60S nascent ribosome State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CAGCGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- 8ETI|1|2|A|61
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8ETI_031 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.3612
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
8ETI|1|2|C|55
8ETI|1|2|A|56
8ETI|1|2|G|57
8ETI|1|2|C|58
8ETI|1|2|G|59
8ETI|1|2|A|60
8ETI|1|2|A|61
8ETI|1|2|A|62
8ETI|1|2|U|63
8ETI|1|2|G|64
Current chains
- Chain 2
- RNA (152-MER)
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain h
- 60S ribosomal protein L35
- Chain j
- 60S ribosomal protein L37-B
- Chain v
- Nucleolar protein 16
- Chain x
- Brix domain-containing protein C4F8.04
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