HL_8EYQ_017

3D structure

PDB id

8EYQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S_delta_ksgA_h44_inactive_conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GAUUAGAUACC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8EYQ_017 not in the Motif Atlas

Geometric match to HL_8H0S_002

Geometric discrepancy: 0.3887

The information below is about HL_8H0S_002

Detailed Annotation

tRNA anticodon loop

Broad Annotation

Anticodon loop

Motif group

HL_10453.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

8EYQ|1|A|G|786
8EYQ|1|A|A|787
8EYQ|1|A|U|788
8EYQ|1|A|U|789
8EYQ|1|A|A|790
8EYQ|1|A|G|791
8EYQ|1|A|A|792
8EYQ|1|A|U|793
8EYQ|1|A|A|794
8EYQ|1|A|C|795
8EYQ|1|A|C|796

Current chains

Chain A

16S_rRNA

Nearby chains

Chain K

30S ribosomal protein S11