HL_8EYU_003
3D structure
- PDB id
- 8EYU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Beetroot dimer bound to DFAME
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 1.95 Å
Loop
- Sequence
- AGGUGGGUGGUGUGGAGGAGUAU
- Length
- 23 nucleotides
- Bulged bases
- 8EYU|1|A|U|19, 8EYU|1|A|U|23, 8EYU|1|A|U|28, 8EYU|1|A|A|31, 8EYU|1|A|U|36
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- G-quadruplex
- Broad Annotation
- No text annotation
- Motif group
- HL_21400.1
- Basepair signature
- cWW-tWH-tSW-cWW-cWH-cHW-cWH-cWH-cHW-cWH-cHW-cWH-cWH-cWH-cWH-cWH
- Number of instances in this motif group
- 1
Unit IDs
8EYU|1|A|A|16
8EYU|1|A|G|17
8EYU|1|A|G|18
8EYU|1|A|U|19
8EYU|1|A|G|20
8EYU|1|A|G|21
8EYU|1|A|G|22
8EYU|1|A|U|23
8EYU|1|A|G|24
8EYU|1|A|G|25
8EYU|1|A|U|26
8EYU|1|A|G|27
8EYU|1|A|U|28
8EYU|1|A|G|29
8EYU|1|A|G|30
8EYU|1|A|A|31
8EYU|1|A|G|32
8EYU|1|A|G|33
8EYU|1|A|A|34
8EYU|1|A|G|35
8EYU|1|A|U|36
8EYU|1|A|A|37
8EYU|1|A|U|38
Current chains
- Chain A
- RNA (49-MER)
Nearby chains
- Chain B
- RNA (49-MER)
Coloring options: