8EYU Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_8EYU_003 | 1/A/16:38 | G-quadruplex HL_21400.1 | ||
| HL_8EYU_001 | 1/A/26:37 | G-quadruplex fragment HL_16991.1 | ||
| HL_8EYU_004 | 1/B/16:38 | G-quadruplex | geometric HL_8EYU_003 HL_21400.1 | |
| HL_8EYU_002 | 1/B/26:37 | G-quadruplex fragment | geometric HL_8EYU_001 HL_16991.1 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_8EYU_002 | 1/A/16:26, 1/A/37:38 | Part of G-quadruplex IL_19852.1 | ||
| IL_8EYU_003 | 1/B/16:26, 1/B/37:38 | Part of G-quadruplex | geometric IL_8EYU_002 IL_19852.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_8EYU_001 | Multiple bulged bases |
Valid loops
No loops found
Problematic loops
No problematic loops
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