HL_8FC6_087
3D structure
- PDB id
- 8FC6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and telithromycin at 2.35A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.35 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 8FC6|1|1a|U|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FC6_087 not in the Motif Atlas
- Homologous match to HL_4LFB_017
- Geometric discrepancy: 0.1005
- The information below is about HL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
8FC6|1|1a|G|786
8FC6|1|1a|A|787
8FC6|1|1a|U|788
8FC6|1|1a|U|789
8FC6|1|1a|A|790
8FC6|1|1a|G|791
8FC6|1|1a|A|792
8FC6|1|1a|U|793
8FC6|1|1a|A|794
8FC6|1|1a|C|795
8FC6|1|1a|C|796
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1A
- Large subunit ribosomal RNA; LSU rRNA
- Chain 1k
- 30S ribosomal protein S11
- Chain 1y
- Ribosome-associated inhibitor A
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