HL_8FKZ_027

3D structure

PDB id

8FKZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State G)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

CUGGCGUG

Length

8 nucleotides

Bulged bases

8FKZ|1|L3|G|1821

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FKZ_027 not in the Motif Atlas

Homologous match to HL_5TBW_024

Geometric discrepancy: 0.3754

The information below is about HL_5TBW_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

8FKZ|1|L3|C|1816
8FKZ|1|L3|U|1817
8FKZ|1|L3|G|1818
8FKZ|1|L3|G|1819
8FKZ|1|L3|C|1820
8FKZ|1|L3|G|1821
8FKZ|1|L3|U|1822
8FKZ|1|L3|G|1823

Current chains

Chain L3

28S rRNA

Nearby chains