HL_8FLB_033

3D structure

PDB id

8FLB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State K2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

UGUAACAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FLB_033 not in the Motif Atlas

Homologous match to HL_8C3A_028

Geometric discrepancy: 0.1902

The information below is about HL_8C3A_028

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_27115.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

22

Unit IDs

8FLB|1|L3|U|2006
8FLB|1|L3|G|2007
8FLB|1|L3|U|2008
8FLB|1|L3|A|2009
8FLB|1|L3|A|2010
8FLB|1|L3|C|2011
8FLB|1|L3|A|2012
8FLB|1|L3|A|2013

Current chains

Chain L3

28S rRNA

Nearby chains

Chain SR

GTP-binding protein 4