HL_8FR8_019
3D structure
- PDB id
- 8FR8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- UUUUGAAGAA
- Length
- 10 nucleotides
- Bulged bases
- 8FR8|1|A|A|666
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FR8_019 not in the Motif Atlas
- Homologous match to HL_7RQB_018
- Geometric discrepancy: 0.1101
- The information below is about HL_7RQB_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_41998.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 69
Unit IDs
8FR8|1|A|U|658
8FR8|1|A|U|659
8FR8|1|A|U|660
8FR8|1|A|U|661
8FR8|1|A|G|662
8FR8|1|A|A|663
8FR8|1|A|A|664
8FR8|1|A|G|665
8FR8|1|A|A|666
8FR8|1|A|A|667
Current chains
- Chain A
- 23S rRNA (3119-MER)
Nearby chains
- Chain 3
- 50S ribosomal protein eL31
- Chain 8
- 50S ribosomal protein L32
- Chain L
- 50S ribosomal protein L3
- Chain V
- 50S ribosomal protein L15
- Chain W
- 50S ribosomal protein L20
- Chain X
- 50S ribosomal protein L21
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