HL_8FRU_024
3D structure
- PDB id
- 8FRU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S subunit of the Giardia lamblia 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- GGACGAUC
- Length
- 8 nucleotides
- Bulged bases
- 8FRU|1|1|A|861, 8FRU|1|1|U|862
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FRU_024 not in the Motif Atlas
- Homologous match to HL_5TBW_026
- Geometric discrepancy: 0.1655
- The information below is about HL_5TBW_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_44398.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8FRU|1|1|G|856
8FRU|1|1|G|857
8FRU|1|1|A|858
8FRU|1|1|C|859
8FRU|1|1|G|860
8FRU|1|1|A|861
8FRU|1|1|U|862
8FRU|1|1|C|863
Current chains
- Chain 1
- 28S rRNA
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain F
- 60S ribosomal protein uL30
- Chain e
- 60S ribosomal protein eL32
- Chain f
- 60S ribosomal protein eL33
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