HL_8FRU_051
3D structure
- PDB id
- 8FRU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S subunit of the Giardia lamblia 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- CUACACCGGACCG
- Length
- 13 nucleotides
- Bulged bases
- 8FRU|1|1|C|2058, 8FRU|1|1|A|2059, 8FRU|1|1|C|2066
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FRU_051 not in the Motif Atlas
- Homologous match to HL_5TBW_055
- Geometric discrepancy: 0.1632
- The information below is about HL_5TBW_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_19870.9
- Basepair signature
- cWW-tHH-cWW-tHS-F-F-tWW
- Number of instances in this motif group
- 8
Unit IDs
8FRU|1|1|C|2055
8FRU|1|1|U|2056
8FRU|1|1|A|2057
8FRU|1|1|C|2058
8FRU|1|1|A|2059
8FRU|1|1|C|2060
8FRU|1|1|C|2061
8FRU|1|1|G|2062
8FRU|1|1|G|2063
8FRU|1|1|A|2064
8FRU|1|1|C|2065
8FRU|1|1|C|2066
8FRU|1|1|G|2067
Current chains
- Chain 1
- 28S rRNA
Nearby chains
- Chain I
- 60S ribosomal protein uL16
- Chain T
- 60S ribosomal protein eL21
- Chain b
- 60S ribosomal protein eL29
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