HL_8G2C_095
3D structure
- PDB id
- 8G2C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.65 Å
Loop
- Sequence
- GUUAAGUC
- Length
- 8 nucleotides
- Bulged bases
- 8G2C|1|1a|G|1094
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8G2C_095 not in the Motif Atlas
- Homologous match to HL_4LFB_025
- Geometric discrepancy: 0.1004
- The information below is about HL_4LFB_025
- Detailed Annotation
- T-loop related
- Broad Annotation
- T-loop
- Motif group
- HL_63894.2
- Basepair signature
- cWW-cWW-F-F-F
- Number of instances in this motif group
- 19
Unit IDs
8G2C|1|1a|G|1089
8G2C|1|1a|U|1090
8G2C|1|1a|U|1091
8G2C|1|1a|A|1092
8G2C|1|1a|A|1093
8G2C|1|1a|G|1094
8G2C|1|1a|U|1095
8G2C|1|1a|C|1096
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1b
- 30S ribosomal protein S2
- Chain 1g
- 30S ribosomal protein S7
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