HL_8G2U_023

3D structure

PDB id

8G2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGUAACAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G2U_023 not in the Motif Atlas

Homologous match to HL_7RQB_022

Geometric discrepancy: 0.4111

The information below is about HL_7RQB_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84085.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

15

Unit IDs

8G2U|1|B|G|712
8G2U|1|B|G|713
8G2U|1|B|U|714
8G2U|1|B|A|715
8G2U|1|B|A|716
8G2U|1|B|C|717
8G2U|1|B|A|718
8G2U|1|B|C|719

Current chains

Chain B

23S rRNA

Nearby chains

Chain n

30S ribosomal protein S15

Chain v

Small subunit ribosomal RNA; SSU rRNA