3D structure

PDB id
8G2U (explore in PDB, NAKB, or RNA 3D Hub)
Description
Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
AGUUCAUAU
Length
9 nucleotides
Bulged bases
8G2U|1|B|U|2473
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_8G2U_063 not in the Motif Atlas
Homologous match to HL_7A0S_059
Geometric discrepancy: 0.1841
The information below is about HL_7A0S_059
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_52011.1
Basepair signature
cWW-tSH-F-F-F-F-F
Number of instances in this motif group
9

Unit IDs

8G2U|1|B|A|2471
8G2U|1|B|G|2472
8G2U|1|B|U|2473
8G2U|1|B|U|2474
8G2U|1|B|C|2475
8G2U|1|B|A|2476
8G2U|1|B|U|2477
8G2U|1|B|A|2478
8G2U|1|B|U|2479

Current chains

Chain B
23S rRNA

Nearby chains

Chain 4
50S ribosomal protein L36
Chain G
50S ribosomal protein L6

Coloring options:


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