HL_8G2U_090

3D structure

PDB id

8G2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

8G2U|1|v|U|842, 8G2U|1|v|A|845

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G2U_090 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.2466

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

8G2U|1|v|C|840
8G2U|1|v|C|841
8G2U|1|v|U|842
8G2U|1|v|U|843
8G2U|1|v|G|844
8G2U|1|v|A|845
8G2U|1|v|G|846

Current chains

Chain v

16S rRNA

Nearby chains

Chain q

30S ribosomal protein S18