HL_8G31_095

3D structure

PDB id

8G31 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

8G31|1|v|G|1094

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G31_095 not in the Motif Atlas

Homologous match to HL_4LFB_025

Geometric discrepancy: 0.0882

The information below is about HL_4LFB_025

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_77436.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

8G31|1|v|G|1089
8G31|1|v|U|1090
8G31|1|v|U|1091
8G31|1|v|A|1092
8G31|1|v|A|1093
8G31|1|v|G|1094
8G31|1|v|U|1095
8G31|1|v|C|1096

Current chains

Chain v

16S

Nearby chains

Chain f

30S ribosomal protein S7

Chain w

30S ribosomal protein S2