HL_8G34_007

3D structure

PDB id

8G34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:1st intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAAUCCAUAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G34_007 not in the Motif Atlas

Homologous match to HL_5J7L_138

Geometric discrepancy: 0.1431

The information below is about HL_5J7L_138

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_68257.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

8G34|1|B|U|158
8G34|1|B|G|159
8G34|1|B|A|160
8G34|1|B|A|161
8G34|1|B|U|162
8G34|1|B|C|163
8G34|1|B|C|164
8G34|1|B|A|165
8G34|1|B|U|166
8G34|1|B|A|167
8G34|1|B|G|168

Current chains

Chain B

23S

Nearby chains

Chain X

50S ribosomal protein L28