HL_8G34_014

3D structure

PDB id

8G34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:1st intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

8G34|1|B|G|386

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G34_014 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1327

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

8G34|1|B|A|382
8G34|1|B|C|383
8G34|1|B|A|384
8G34|1|B|C|385
8G34|1|B|G|386
8G34|1|B|U|387
8G34|1|B|G|388
8G34|1|B|G|389
8G34|1|B|U|390
8G34|1|B|A|391
8G34|1|B|U|392

Current chains

Chain B

23S

Nearby chains

Chain X

50S ribosomal protein L28