HL_8G60_011
3D structure
- PDB id
- 8G60 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.54 Å
Loop
- Sequence
- CUUGGGAAUG
- Length
- 10 nucleotides
- Bulged bases
- 8G60|1|L5|G|294, 8G60|1|L5|A|295, 8G60|1|L5|A|296
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8G60_011 not in the Motif Atlas
- Homologous match to HL_5TBW_008
- Geometric discrepancy: 0.1051
- The information below is about HL_5TBW_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_77436.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 23
Unit IDs
8G60|1|L5|C|289
8G60|1|L5|U|290
8G60|1|L5|U|291
8G60|1|L5|G|292
8G60|1|L5|G|293
8G60|1|L5|G|294
8G60|1|L5|A|295
8G60|1|L5|A|296
8G60|1|L5|U|297
8G60|1|L5|G|298
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LL
- eL13
- Chain LN
- eL15
- Chain La
- uL15
- Chain Lo
- eL42
Coloring options: