HL_8G61_112
3D structure
- PDB id
- 8G61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.94 Å
Loop
- Sequence
- GAC(B8N)CAACAC
- Length
- 10 nucleotides
- Bulged bases
- 8G61|1|S2|A|1253
- QA status
- Modified nucleotides: B8N
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8G61_112 not in the Motif Atlas
- Homologous match to HL_8C3A_217
- Geometric discrepancy: 0.1106
- The information below is about HL_8C3A_217
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.2
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8G61|1|S2|G|1245
8G61|1|S2|A|1246
8G61|1|S2|C|1247
8G61|1|S2|B8N|1248
8G61|1|S2|C|1249
8G61|1|S2|A|1250
8G61|1|S2|A|1251
8G61|1|S2|C|1252
8G61|1|S2|A|1253
8G61|1|S2|C|1254
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain At
- Transfer RNA; tRNA
- Chain Pt
- Transfer RNA; tRNA
- Chain SP
- 40S ribosomal protein S15
- Chain SQ
- 40S ribosomal protein S16
- Chain SU
- 40S ribosomal protein S20
- Chain Sd
- 40S ribosomal protein S29
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