HL_8G7S_012

3D structure

PDB id

8G7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with P-site tRNAIle(LAU) bound to the cognate AUA codon (Structure IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

8G7S|1|A|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G7S_012 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1098

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

8G7S|1|A|A|382
8G7S|1|A|C|383
8G7S|1|A|A|384
8G7S|1|A|C|385
8G7S|1|A|G|386
8G7S|1|A|U|387
8G7S|1|A|G|388
8G7S|1|A|G|389
8G7S|1|A|U|390
8G7S|1|A|A|391
8G7S|1|A|U|392

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain Z

50S ribosomal protein L28

Chain y

Transfer RNA; tRNA