HL_8GLP_021
3D structure
- PDB id
- 8GLP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.67 Å
Loop
- Sequence
- CCGCG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8GLP_021 not in the Motif Atlas
- Geometric match to HL_4V9F_041
- Geometric discrepancy: 0.1512
- The information below is about HL_4V9F_041
- Detailed Annotation
- Mini UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_48778.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 46
Unit IDs
8GLP|1|L5|C|1480
8GLP|1|L5|C|1481
8GLP|1|L5|G|1482
8GLP|1|L5|C|1483
8GLP|1|L5|G|1484
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LL
- 60S ribosomal protein L13
- Chain Li
- 60S ribosomal protein L36
Coloring options: