HL_8HFR_058
3D structure
- PDB id
- 8HFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NPC-trapped pre-60S particle
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.64 Å
Loop
- Sequence
- UUCAGUGUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8HFR_058 not in the Motif Atlas
- Homologous match to HL_8C3A_059
- Geometric discrepancy: 0.0975
- The information below is about HL_8C3A_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34636.1
- Basepair signature
- cWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
8HFR|1|1e|U|2724
8HFR|1|1e|U|2725
8HFR|1|1e|C|2726
8HFR|1|1e|A|2727
8HFR|1|1e|G|2728
8HFR|1|1e|U|2729
8HFR|1|1e|G|2730
8HFR|1|1e|U|2731
8HFR|1|1e|G|2732
Current chains
- Chain 1e
- 25S ribosomal RNA
Nearby chains
- Chain Qk
- 60S ribosomal protein L18-A
- Chain Tl
- 60S ribosomal protein L21-A
- Chain aw
- 60S ribosomal protein L28
- Chain mS
- 60S ribosomal protein L42-A
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