HL_8HL2_036

3D structure

PDB id

8HL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

UUUAUAA

Length

7 nucleotides

Bulged bases

8HL2|1|A23S|U|146

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8HL2_036 not in the Motif Atlas

Geometric match to HL_5TBW_012

Geometric discrepancy: 0.3991

The information below is about HL_5TBW_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.1

Basepair signature

cWW-F-F

Number of instances in this motif group

7

Unit IDs

8HL2|1|A23S|U|142
8HL2|1|A23S|U|143
8HL2|1|A23S|U|144
8HL2|1|A23S|A|145
8HL2|1|A23S|U|146
8HL2|1|A23S|A|147
8HL2|1|A23S|A|148

Current chains

Chain A23S

23s rRNA (3000-MER)

Nearby chains