HL_8IDY_066
3D structure
- PDB id
- 8IDY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State F
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAUUGUUCACC
- Length
- 11 nucleotides
- Bulged bases
- 8IDY|1|2|U|4498
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8IDY_066 not in the Motif Atlas
- Geometric match to HL_6GSK_218
- Geometric discrepancy: 0.3508
- The information below is about HL_6GSK_218
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_14063.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
8IDY|1|2|G|4495
8IDY|1|2|A|4496
8IDY|1|2|U|4497
8IDY|1|2|U|4498
8IDY|1|2|G|4499
8IDY|1|2|U|4500
8IDY|1|2|U|4501
8IDY|1|2|C|4502
8IDY|1|2|A|4503
8IDY|1|2|C|4504
8IDY|1|2|C|4505
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain 4
- GTP-binding protein 4
- Chain A
- G Protein Nucleolar 2
- Chain B
- 60S ribosomal protein L3
- Chain e
- 60S ribosomal protein L23
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