HL_8IP8_001
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UAAGCAUA
- Length
- 8 nucleotides
- Bulged bases
- 8IP8|1|RB|A|39
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8IP8_001 not in the Motif Atlas
- Homologous match to HL_8P9A_113
- Geometric discrepancy: 0.0757
- The information below is about HL_8P9A_113
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_48677.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
8IP8|1|RB|U|37
8IP8|1|RB|A|38
8IP8|1|RB|A|39
8IP8|1|RB|G|40
8IP8|1|RB|C|41
8IP8|1|RB|A|42
8IP8|1|RB|U|43
8IP8|1|RB|A|44
Current chains
- Chain RB
- 60S ribosomal RNA
Nearby chains
- Chain HA
- 60S ribosomal protein eL15
- Chain IA
- 60S ribosomal protein uL15
- Chain KB
- 60S ribosomal protein eL13
- Chain WA
- 60S ribosomal protein eL42
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