HL_8IP8_036
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUUAAGAUUUC
- Length
- 11 nucleotides
- Bulged bases
- 8IP8|1|RB|U|1603, 8IP8|1|RB|U|1604, 8IP8|1|RB|U|1605
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8IP8_036 not in the Motif Atlas
- Homologous match to HL_8P9A_146
- Geometric discrepancy: 0.1484
- The information below is about HL_8P9A_146
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_77449.1
- Basepair signature
- cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
8IP8|1|RB|G|1596
8IP8|1|RB|U|1597
8IP8|1|RB|U|1598
8IP8|1|RB|A|1599
8IP8|1|RB|A|1600
8IP8|1|RB|G|1601
8IP8|1|RB|A|1602
8IP8|1|RB|U|1603
8IP8|1|RB|U|1604
8IP8|1|RB|U|1605
8IP8|1|RB|C|1606
Current chains
- Chain RB
- 60S ribosomal RNA
Nearby chains
- Chain LA
- 60S ribosomal protein eL19
- Chain NA
- 60S ribosomal protein uL23
- Chain PB
- 60S ribosomal protein eL34
- Chain VA
- 60S ribosomal protein eL39
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