HL_8IP8_057
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUAAAAGAUAACG
- Length
- 13 nucleotides
- Bulged bases
- 8IP8|1|RB|A|2634, 8IP8|1|RB|C|2641
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8IP8_057 not in the Motif Atlas
- Homologous match to HL_8P9A_166
- Geometric discrepancy: 0.0922
- The information below is about HL_8P9A_166
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02042.1
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
8IP8|1|RB|U|2630
8IP8|1|RB|U|2631
8IP8|1|RB|A|2632
8IP8|1|RB|A|2633
8IP8|1|RB|A|2634
8IP8|1|RB|A|2635
8IP8|1|RB|G|2636
8IP8|1|RB|A|2637
8IP8|1|RB|U|2638
8IP8|1|RB|A|2639
8IP8|1|RB|A|2640
8IP8|1|RB|C|2641
8IP8|1|RB|G|2642
Current chains
- Chain RB
- 60S ribosomal RNA
Nearby chains
- Chain BA
- 60S ribosomal protein eL21
- Chain HB
- 60S ribosomal protein uL16
- Chain OB
- 60S ribosomal protein eL29
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