HL_8IP8_060
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UCCAGUACG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8IP8_060 not in the Motif Atlas
- Homologous match to HL_8C3A_059
- Geometric discrepancy: 0.1899
- The information below is about HL_8C3A_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34636.1
- Basepair signature
- cWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
8IP8|1|RB|U|2721
8IP8|1|RB|C|2722
8IP8|1|RB|C|2723
8IP8|1|RB|A|2724
8IP8|1|RB|G|2725
8IP8|1|RB|U|2726
8IP8|1|RB|A|2727
8IP8|1|RB|C|2728
8IP8|1|RB|G|2729
Current chains
- Chain RB
- 60S ribosomal RNA
Nearby chains
- Chain BA
- 60S ribosomal protein eL21
- Chain IA
- 60S ribosomal protein uL15
- Chain JA
- 60S ribosomal protein eL18
- Chain WA
- 60S ribosomal protein eL42
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