HL_8OI5_047
3D structure
- PDB id
- 8OI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CAUGGAGGGUGUAGAAUAAGUGGGAGCUUCGGCGCCGGUGAAAUACCACUACCUCUAUAG
- Length
- 60 nucleotides
- Bulged bases
- 8OI5|1|1|U|2431, 8OI5|1|1|U|2438, 8OI5|1|1|A|2446, 8OI5|1|1|C|2448, 8OI5|1|1|U|2450, 8OI5|1|1|G|2459, 8OI5|1|1|C|2467, 8OI5|1|1|C|2468, 8OI5|1|1|U|2479, 8OI5|1|1|A|2480
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OI5|1|1|C|2422
8OI5|1|1|A|2423
8OI5|1|1|U|2424
8OI5|1|1|G|2425
8OI5|1|1|G|2426
8OI5|1|1|A|2427
8OI5|1|1|G|2428
8OI5|1|1|G|2429
8OI5|1|1|G|2430
8OI5|1|1|U|2431
8OI5|1|1|G|2432
8OI5|1|1|U|2433
8OI5|1|1|A|2434
8OI5|1|1|G|2435
8OI5|1|1|A|2436
8OI5|1|1|A|2437
8OI5|1|1|U|2438
8OI5|1|1|A|2439
8OI5|1|1|A|2440
8OI5|1|1|G|2441
8OI5|1|1|U|2442
8OI5|1|1|G|2443
8OI5|1|1|G|2444
8OI5|1|1|G|2445
8OI5|1|1|A|2446
8OI5|1|1|G|2447
8OI5|1|1|C|2448
8OI5|1|1|U|2449
8OI5|1|1|U|2450
8OI5|1|1|C|2451
8OI5|1|1|G|2452
8OI5|1|1|G|2453
8OI5|1|1|C|2454
8OI5|1|1|G|2455
8OI5|1|1|C|2456
8OI5|1|1|C|2457
8OI5|1|1|G|2458
8OI5|1|1|G|2459
8OI5|1|1|U|2460
8OI5|1|1|G|2461
8OI5|1|1|A|2462
8OI5|1|1|A|2463
8OI5|1|1|A|2464
8OI5|1|1|U|2465
8OI5|1|1|A|2466
8OI5|1|1|C|2467
8OI5|1|1|C|2468
8OI5|1|1|A|2469
8OI5|1|1|C|2470
8OI5|1|1|U|2471
8OI5|1|1|A|2472
8OI5|1|1|C|2473
8OI5|1|1|C|2474
8OI5|1|1|U|2475
8OI5|1|1|C|2476
8OI5|1|1|U|2477
8OI5|1|1|A|2478
8OI5|1|1|U|2479
8OI5|1|1|A|2480
8OI5|1|1|G|2481
Current chains
- Chain 1
- 25S
Nearby chains
- Chain AJ
- 60S ribosomal protein L36
- Chain p
- 60S ribosomal protein L8
Coloring options: