Motif HL_45584.1 Version HL_45584.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28 | 29 | 30 | 31 | 32 | 33 | 34 | 35 | 36 | 37 | 38 | 39 | 40 | 41 | 42 | 43 | 44 | 45 | 46 | 47 | 48 | 49 | 50 | 1-50 | 3-49 | 5-48 | 8-45 | 9-44 | 10-35 | 11-36 | 12-34 | 12-37 | 20-42 | 23-28 | 29-39 | 37-38 | ||||||||||||||||||||||||||||||||||||||||||||||||||
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| 1 | HL_8OI5_047 | 8OI5 | 0.0000 | 10 | 1 | LSU rRNA | C | 2422 | A | 2423 | U | 2424 | G | 2425 | G | 2426 | A | 2427 | G | 2428 | G | 2429 | G | 2430 | G | 2432 | U | 2433 | A | 2434 | G | 2435 | A | 2436 | A | 2437 | A | 2439 | A | 2440 | G | 2441 | U | 2442 | G | 2443 | G | 2444 | G | 2445 | G | 2447 | U | 2449 | C | 2451 | G | 2452 | G | 2453 | C | 2454 | G | 2455 | C | 2456 | C | 2457 | G | 2458 | U | 2460 | G | 2461 | A | 2462 | A | 2463 | A | 2464 | U | 2465 | A | 2466 | A | 2469 | C | 2470 | U | 2471 | A | 2472 | C | 2473 | C | 2474 | U | 2475 | C | 2476 | U | 2477 | A | 2478 | G | 2481 | cWW | ncWW | ncWW | ncWW | ncWW | tHH | ntHH | ncsS | ntWW | ncWW | ncWW | ncSs | ncSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAUGGAGGGUGUAGAAUAAGUGGGAGCUUCGGCGCCGGUGAAAUACCACUACCUCUAUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUGGAGGGUGUAGAAUAAGUGGGAGCUUCGGCGCCGGUGAAAUACCACUACCUCUAUA | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-tHH-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: