HL_8OI5_155
3D structure
- PDB id
- 8OI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GAUAGUGGC
- Length
- 9 nucleotides
- Bulged bases
- 8OI5|1|B|G|335
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OI5_155 not in the Motif Atlas
- Homologous match to HL_8C3A_199
- Geometric discrepancy: 0.0321
- The information below is about HL_8C3A_199
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_84299.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8OI5|1|B|G|328
8OI5|1|B|A|329
8OI5|1|B|U|330
8OI5|1|B|A|331
8OI5|1|B|G|332
8OI5|1|B|U|333
8OI5|1|B|G|334
8OI5|1|B|G|335
8OI5|1|B|C|336
Current chains
- Chain B
- 18S
Nearby chains
- Chain K
- 40S ribosomal protein S8
- Chain N
- 40S ribosomal protein S11A
Coloring options: