HL_8OIN_077
3D structure
- PDB id
- 8OIN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUUAAAUUAUCAAAG
- Length
- 15 nucleotides
- Bulged bases
- 8OIN|1|B9|U|17, 8OIN|1|B9|C|21, 8OIN|1|B9|A|23
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OIN_077 not in the Motif Atlas
- Homologous match to HL_4QEI_001
- Geometric discrepancy: 0.5098
- The information below is about HL_4QEI_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_76195.1
- Basepair signature
- cWW-cWW-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8OIN|1|B9|C|11
8OIN|1|B9|U|12
8OIN|1|B9|U|13
8OIN|1|B9|A|14
8OIN|1|B9|A|15
8OIN|1|B9|A|16
8OIN|1|B9|U|17
8OIN|1|B9|U|18
8OIN|1|B9|A|19
8OIN|1|B9|U|20
8OIN|1|B9|C|21
8OIN|1|B9|A|22
8OIN|1|B9|A|23
8OIN|1|B9|A|24
8OIN|1|B9|G|25
Current chains
- Chain B9
- CP Phe-tRNA
Nearby chains
- Chain BW
- Mitochondrial ribosomal protein L18
- Chain Ba
- 39S ribosomal protein L52, mitochondrial
- Chain Bn
- Mitochondrial ribosomal protein L38
- Chain Bp
- Mitochondrial ribosomal protein L40
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