HL_8OIQ_053
3D structure
- PDB id
- 8OIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- AAAACAUU
- Length
- 8 nucleotides
- Bulged bases
- 8OIQ|1|B8|A|56, 8OIQ|1|B8|A|59
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OIQ_053 not in the Motif Atlas
- Geometric match to HL_7A0S_006
- Geometric discrepancy: 0.3373
- The information below is about HL_7A0S_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_48677.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
8OIQ|1|B8|A|54
8OIQ|1|B8|A|55
8OIQ|1|B8|A|56
8OIQ|1|B8|A|57
8OIQ|1|B8|C|58
8OIQ|1|B8|A|59
8OIQ|1|B8|U|60
8OIQ|1|B8|U|61
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BE
- Mitochondrial ribosomal protein L28
- Chain BO
- Mitochondrial ribosomal protein L9
- Chain BT
- 39S ribosomal protein L15, mitochondrial
- Chain Bz
- Mitochondrial ribosomal protein L51
Coloring options: