HL_8OIR_028
3D structure
- PDB id
- 8OIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S human mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GACUAACCC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OIR_028 not in the Motif Atlas
- Homologous match to HL_7RQB_017
- Geometric discrepancy: 0.5161
- The information below is about HL_7RQB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OIR|1|B8|G|161
8OIR|1|B8|A|162
8OIR|1|B8|C|163
8OIR|1|B8|U|164
8OIR|1|B8|A|165
8OIR|1|B8|A|166
8OIR|1|B8|C|167
8OIR|1|B8|C|168
8OIR|1|B8|C|169
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BA
- 39S ribosomal protein L22, mitochondrial
- Chain BR
- 39S ribosomal protein L13, mitochondrial
- Chain BY
- 39S ribosomal protein L20, mitochondrial
- Chain BZ
- 39S ribosomal protein L21, mitochondrial
- Chain Br
- 39S ribosomal protein L42, mitochondrial
- Chain Bs
- 39S ribosomal protein L43, mitochondrial
Coloring options: