HL_8OIS_009
3D structure
- PDB id
- 8OIS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUGUAAAAAA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OIS_009 not in the Motif Atlas
- Geometric match to HL_4LFB_015
- Geometric discrepancy: 0.1896
- The information below is about HL_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
8OIS|1|AA|U|342
8OIS|1|AA|U|343
8OIS|1|AA|G|344
8OIS|1|AA|U|345
8OIS|1|AA|A|346
8OIS|1|AA|A|347
8OIS|1|AA|A|348
8OIS|1|AA|A|349
8OIS|1|AA|A|350
8OIS|1|AA|A|351
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AF
- 28S ribosomal protein S7, mitochondrial
- Chain AI
- mRNA
- Chain AQ
- 28S ribosomal protein S21, mitochondrial
- Chain Ai
- 28S ribosomal protein S11, mitochondrial
Coloring options: