HL_8OIT_011
3D structure
- PDB id
- 8OIT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGUAGCAAAA
- Length
- 10 nucleotides
- Bulged bases
- 8OIT|1|B8|A|287, 8OIT|1|B8|A|291
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OIT_011 not in the Motif Atlas
- Homologous match to HL_7RQB_023
- Geometric discrepancy: 0.1337
- The information below is about HL_7RQB_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39334.6
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 6
Unit IDs
8OIT|1|B8|U|284
8OIT|1|B8|G|285
8OIT|1|B8|U|286
8OIT|1|B8|A|287
8OIT|1|B8|G|288
8OIT|1|B8|C|289
8OIT|1|B8|A|290
8OIT|1|B8|A|291
8OIT|1|B8|A|292
8OIT|1|B8|A|293
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BA
- 39S ribosomal protein L22, mitochondrial
- Chain BJ
- 39S ribosomal protein L34, mitochondrial
- Chain BM
- 39S ribosomal protein L3, mitochondrial
- Chain Bu
- 39S ribosomal protein L45, mitochondrial
Coloring options: