HL_8ONY_008
3D structure
- PDB id
- 8ONY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human Methionine Aminopeptidase 2 at the 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.92 Å
Loop
- Sequence
- GUGAAUUGCAGGACACAUUGAUC
- Length
- 23 nucleotides
- Bulged bases
- 8ONY|1|8|U|85
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8ONY_008 not in the Motif Atlas
- Homologous match to HL_8C3A_075
- Geometric discrepancy: 0.5719
- The information below is about HL_8C3A_075
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_07882.1
- Basepair signature
- cWW-F-F-tSH-tHS-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
8ONY|1|8|G|68
8ONY|1|8|U|69
8ONY|1|8|G|70
8ONY|1|8|A|71
8ONY|1|8|A|72
8ONY|1|8|U|73
8ONY|1|8|U|74
8ONY|1|8|G|75
8ONY|1|8|C|76
8ONY|1|8|A|77
8ONY|1|8|G|78
8ONY|1|8|G|79
8ONY|1|8|A|80
8ONY|1|8|C|81
8ONY|1|8|A|82
8ONY|1|8|C|83
8ONY|1|8|A|84
8ONY|1|8|U|85
8ONY|1|8|U|86
8ONY|1|8|G|87
8ONY|1|8|A|88
8ONY|1|8|U|89
8ONY|1|8|C|90
Current chains
- Chain 8
- 5.8S rRNA
Nearby chains
- Chain A
- Methionine aminopeptidase 2
- Chain LY
- 60S ribosomal protein L26
- Chain Lh
- 60S ribosomal protein L35
Coloring options: