HL_8OO0_008
3D structure
- PDB id
- 8OO0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUUGGGAAUG
- Length
- 10 nucleotides
- Bulged bases
- 8OO0|1|1|G|276, 8OO0|1|1|A|277, 8OO0|1|1|A|278
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OO0_008 not in the Motif Atlas
- Homologous match to HL_5TBW_008
- Geometric discrepancy: 0.1481
- The information below is about HL_5TBW_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_77436.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 23
Unit IDs
8OO0|1|1|U|271
8OO0|1|1|U|272
8OO0|1|1|U|273
8OO0|1|1|G|274
8OO0|1|1|G|275
8OO0|1|1|G|276
8OO0|1|1|A|277
8OO0|1|1|A|278
8OO0|1|1|U|279
8OO0|1|1|G|280
Current chains
- Chain 1
- 28S rRNA
Nearby chains
- Chain LL
- 60S ribosomal protein L13
- Chain LN
- Ribosomal protein L15
- Chain La
- Ribosomal protein L18e/L15P domain-containing protein
- Chain Lo
- 60S ribosomal protein L44-like protein
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