HL_8OVE_009
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UGUAGUGGA
- Length
- 9 nucleotides
- Bulged bases
- 8OVE|1|AA|G|431
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OVE_009 not in the Motif Atlas
- Homologous match to HL_8C3A_199
- Geometric discrepancy: 0.1367
- The information below is about HL_8C3A_199
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_84299.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8OVE|1|AA|U|424
8OVE|1|AA|G|425
8OVE|1|AA|U|426
8OVE|1|AA|A|427
8OVE|1|AA|G|428
8OVE|1|AA|U|429
8OVE|1|AA|G|430
8OVE|1|AA|G|431
8OVE|1|AA|A|432
Current chains
- Chain AA
- SSU rRNA
Nearby chains
- Chain A5
- 40S ribosomal protein S8
- Chain AE
- 40S ribosomal proteins S11, putative
Coloring options: