HL_8OVE_068
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GAAUGAAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OVE_068 not in the Motif Atlas
- Homologous match to HL_8C3A_026
- Geometric discrepancy: 0.1849
- The information below is about HL_8C3A_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_44398.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8OVE|1|BA|G|1282
8OVE|1|BA|A|1283
8OVE|1|BA|A|1284
8OVE|1|BA|U|1285
8OVE|1|BA|G|1286
8OVE|1|BA|A|1287
8OVE|1|BA|A|1288
8OVE|1|BA|C|1289
Current chains
- Chain BA
- LUS_alpha rRNA
Nearby chains
- Chain BB
- Large subunit ribosomal RNA; LSU rRNA
- Chain BD
- 5S ribosomal RNA; 5S rRNA
- Chain Bi
- 60S ribosomal protein L32, putative
- Chain Bl
- 60S ribosomal protein L35A, putative
- Chain Bw
- 60S ribosomal protein L7, putative
Coloring options: