HL_8OVE_109
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GCGUUACUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OVE_109 not in the Motif Atlas
- Geometric match to HL_2Y9H_005
- Geometric discrepancy: 0.2901
- The information below is about HL_2Y9H_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_44506.3
- Basepair signature
- cWW-cWW-F
- Number of instances in this motif group
- 5
Unit IDs
8OVE|1|BE|G|116
8OVE|1|BE|C|117
8OVE|1|BE|G|118
8OVE|1|BE|U|119
8OVE|1|BE|U|120
8OVE|1|BE|A|121
8OVE|1|BE|C|122
8OVE|1|BE|U|123
8OVE|1|BE|C|124
Current chains
- Chain BE
- SrRNA 1
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BT
- 60S ribosomal protein L19, putative
- Chain Bg
- 60S ribosomal protein L30
- Chain Bo
- 60S ribosomal protein L37a, putative
Coloring options: