HL_8OVE_114
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CGAAGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OVE_114 not in the Motif Atlas
- Homologous match to HL_8C3A_067
- Geometric discrepancy: 0.1634
- The information below is about HL_8C3A_067
- Detailed Annotation
- Ribsomal LSU H95
- Broad Annotation
- Ribsomal LSU H95
- Motif group
- HL_65794.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
8OVE|1|BG|C|96
8OVE|1|BG|G|97
8OVE|1|BG|A|98
8OVE|1|BG|A|99
8OVE|1|BG|G|100
8OVE|1|BG|G|101
Current chains
- Chain BG
- SrRNA 2
Nearby chains
- Chain BB
- Large subunit ribosomal RNA; LSU rRNA
- Chain BE
- SrRNA 1
- Chain BH
- SrRNA 4
- Chain BT
- 60S ribosomal protein L19, putative
- Chain BV
- 60S ribosomal protein L22, putative
- Chain Bh
- 60S ribosomal subunit protein L31, putative
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