HL_8OZ0_026
3D structure
- PDB id
- 8OZ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human 48S translation initiation complex with eIF4F and eIF4A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GAC(C4J)CAACAC
- Length
- 10 nucleotides
- Bulged bases
- 8OZ0|1|W|A|1253
- QA status
- Modified nucleotides: C4J
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OZ0_026 not in the Motif Atlas
- Homologous match to HL_8P9A_215
- Geometric discrepancy: 0.141
- The information below is about HL_8P9A_215
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97521.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8OZ0|1|W|G|1245
8OZ0|1|W|A|1246
8OZ0|1|W|C|1247
8OZ0|1|W|C4J|1248
8OZ0|1|W|C|1249
8OZ0|1|W|A|1250
8OZ0|1|W|A|1251
8OZ0|1|W|C|1252
8OZ0|1|W|A|1253
8OZ0|1|W|C|1254
Current chains
- Chain W
- 18S rRNA
Nearby chains
- Chain G
- Eukaryotic translation initiation factor 1A, X-chromosomal
- Chain g
- 40S ribosomal protein S16
- Chain o
- 40S ribosomal protein S29
- Chain w
- 40S ribosomal protein S20
- Chain y
- Transfer RNA; tRNA
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