HL_8P2G_095
3D structure
- PDB id
- 8P2G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.02 Å
Loop
- Sequence
- GAA(2MG)(5MC)AACGC
- Length
- 10 nucleotides
- Bulged bases
- 8P2G|1|a|A|977, 8P2G|1|a|G|980
- QA status
- Modified nucleotides: 2MG, 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P2G_095 not in the Motif Atlas
- Homologous match to HL_4LFB_021
- Geometric discrepancy: 0.1638
- The information below is about HL_4LFB_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8P2G|1|a|G|972
8P2G|1|a|A|973
8P2G|1|a|A|974
8P2G|1|a|2MG|975
8P2G|1|a|5MC|976
8P2G|1|a|A|977
8P2G|1|a|A|978
8P2G|1|a|C|979
8P2G|1|a|G|980
8P2G|1|a|C|981
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain D
- Transfer RNA; tRNA
- Chain j
- 30S ribosomal protein S9
- Chain k
- Small ribosomal subunit protein uS10
- Chain n
- 30S ribosomal protein S13
Coloring options: