HL_8P2K_009
3D structure
- PDB id
- 8P2K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and METAP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CCUGAGAAACGG
- Length
- 12 nucleotides
- Bulged bases
- 8P2K|1|A2|C|451, 8P2K|1|A2|G|452
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P2K_009 not in the Motif Atlas
- Homologous match to HL_8C3A_201
- Geometric discrepancy: 0.0868
- The information below is about HL_8C3A_201
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8P2K|1|A2|C|442
8P2K|1|A2|C|443
8P2K|1|A2|U|444
8P2K|1|A2|G|445
8P2K|1|A2|A|446
8P2K|1|A2|G|447
8P2K|1|A2|A|448
8P2K|1|A2|A|449
8P2K|1|A2|A|450
8P2K|1|A2|C|451
8P2K|1|A2|G|452
8P2K|1|A2|G|453
Current chains
- Chain A2
- 18s rRNA
Nearby chains
- Chain Ad
- 40S ribosomal protein S4
- Chain Af
- 40S ribosomal protein S6
- Chain Ah
- 40S ribosomal protein S8
- Chain Ax
- 40S ribosomal protein S24
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