HL_8P2K_059
3D structure
- PDB id
- 8P2K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and METAP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- ACGUGCAAAU
- Length
- 10 nucleotides
- Bulged bases
- 8P2K|1|B5|U|1551, 8P2K|1|B5|A|1555
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P2K_059 not in the Motif Atlas
- Homologous match to HL_8C3A_020
- Geometric discrepancy: 0.0948
- The information below is about HL_8C3A_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39334.8
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 7
Unit IDs
8P2K|1|B5|A|1548
8P2K|1|B5|C|1549
8P2K|1|B5|G|1550
8P2K|1|B5|U|1551
8P2K|1|B5|G|1552
8P2K|1|B5|C|1553
8P2K|1|B5|A|1554
8P2K|1|B5|A|1555
8P2K|1|B5|A|1556
8P2K|1|B5|U|1557
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BB
- Ribosomal protein L3
- Chain BK
- Glucose-6-phosphate isomerase
- Chain BP
- uL22
- Chain Bj
- Ribosomal protein L37
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