HL_8P2K_120
3D structure
- PDB id
- 8P2K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and METAP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AGGUGAAAU(PSU)
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P2K_120 not in the Motif Atlas
- Homologous match to HL_8C3A_211
- Geometric discrepancy: 0.2216
- The information below is about HL_8C3A_211
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.3
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
8P2K|1|A2|A|958
8P2K|1|A2|G|959
8P2K|1|A2|G|960
8P2K|1|A2|U|961
8P2K|1|A2|G|962
8P2K|1|A2|A|963
8P2K|1|A2|A|964
8P2K|1|A2|A|965
8P2K|1|A2|U|966
8P2K|1|A2|PSU|967
Current chains
- Chain A2
- 18s rRNA
Nearby chains
- Chain Aa
- 40S ribosomal protein S3a
- Chain Ae
- Ribosomal protein S5
- Chain An
- 40S ribosomal protein S14
- Chain B5
- Large subunit ribosomal RNA; LSU rRNA
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